net.obsearch.index.ghs.impl
Class Sketch64Double<O extends OBDouble>

java.lang.Object
  net.obsearch.index.AbstractOBIndex<O>
      net.obsearch.index.pivot.AbstractPivotOBIndex<O>
          net.obsearch.index.bucket.AbstractBucketIndex<O,B,Q,BC>
              net.obsearch.index.sorter.AbstractBucketSorter<O,B,Q,BC,net.obsearch.index.ghs.SketchProjection,net.obsearch.index.ghs.CBitVector>
                  net.obsearch.index.ghs.AbstractSketch64<O,BucketObjectDouble<O>,OBQueryDouble<O>,SleekBucketDouble<O>>
                      net.obsearch.index.ghs.impl.Sketch64Double<O>

All Implemented Interfaces:

net.obsearch.Index<O>, IndexDouble<O>

public final class Sketch64Double<O extends OBDouble>
extends net.obsearch.index.ghs.AbstractSketch64<O,BucketObjectDouble<O>,OBQueryDouble<O>,SleekBucketDouble<O>>
implements IndexDouble<O>

Nested Class Summary

protected class

Sketch64Double.KnnIterator Implements a knn graph iteration over all the dataset

Nested classes/interfaces inherited from class net.obsearch.index.bucket.AbstractBucketIndex

net.obsearch.index.bucket.AbstractBucketIndex.BucketIterator

Field Summary

Fields inherited from class net.obsearch.index.ghs.AbstractSketch64

distortionStats, m, maskPivotSelector, pivotGrid

Fields inherited from class net.obsearch.index.sorter.AbstractBucketSorter

bucketCache, bucketPivotCount, kEstimators, projections, projectionStorage, userK

Fields inherited from class net.obsearch.index.bucket.AbstractBucketIndex

Buckets

Fields inherited from class net.obsearch.index.pivot.AbstractPivotOBIndex

intrinsicDimensionalityPairs, pivots, pivotSelector

Fields inherited from class net.obsearch.index.AbstractOBIndex

A, fact, isFrozen, stats, type

Fields inherited from interface net.obsearch.Index

ID_SIZE

Constructor Summary

Sketch64Double()

Sketch64Double(Class<O> type, net.obsearch.pivots.IncrementalPairPivotSelector<O> pivotSelector, int m)
Create a new Sketch64Double with m bytes.

Method Summary

protected double	distance(O a, O b)
double[]	fullMatchLite(O query, boolean filterSame) This method returns a list of all the distances of the query against the DB.
BucketObjectDouble<O>	getBucket(O object)
protected int	getCPSize()
protected net.obsearch.query.AbstractOBQuery<O>	getKQuery(O object, int k)
protected Class<net.obsearch.index.ghs.CBitVector>	getPInstance()
net.obsearch.index.ghs.SketchProjection	getProjection(BucketObjectDouble<O> bucket) Compute the sketch for the given object.
protected SleekBucketDouble<O>	instantiateBucketContainer(byte[] data, byte[] address)
Iterator<List<OBQueryDouble<O>>>	knnGraph(int k, double r) Performs a knn graph search
protected void	maxKEstimationAux(O object) Get the kMax closest objects.
protected int	primitiveDataTypeSize()
void	searchOB(O object, double r, net.obsearch.filter.Filter<O> filter, OBPriorityQueueDouble<O> result) Searches the Index and returns OBResult (ID, OB and distance) elements that are closer to "object".
void	searchOB(O object, double r, OBPriorityQueueDouble<O> result) Searches the Index and returns OBResult (ID, OB and distance) elements that are closer to "object".

Methods inherited from class net.obsearch.index.ghs.AbstractSketch64

bytesToCompactRepresentation, compactRepresentationToBytes, debugDist, freeze, updateDistance

Methods inherited from class net.obsearch.index.sorter.AbstractBucketSorter

bucketStats, calculateEstimators, close, estimateK, freezeDefault, getAddress, getAllObjects, getBucketContainer, getBucketPivotCount, getExpectedEP, getMaxK, init, initByteArrayBuckets, initCache, insertBucket, insertBucketBulk, loadMasks, maxKEstimation, printEstimation, searchBuckets, setExpectedError, setKAlpha, setMaxK, setSampleSize

Methods inherited from class net.obsearch.index.bucket.AbstractBucketIndex

debug, deleteAux, exists, getBuckets, getObjectFreeze, idMap, insertAux, insertAuxBulk, iterateBuckets

Methods inherited from class net.obsearch.index.pivot.AbstractPivotOBIndex

calculateIntrinsicDimensionality, createPivotsArray, getObjects, getPivotCount, selectPivots

Methods inherited from class net.obsearch.index.AbstractOBIndex

assertFrozen, bytesToObject, bytesToObject, clearACache, databaseSize, delete, emptyPivotsArray, findAux, getBox, getObject, getStats, getType, initStorageDevices, insert, insert, insertBulk, insertBulk, intrinsicDimensionality, isFrozen, isPreFreeze, isPreFreezeCheck, loadObject, loadPivots, objectToByteBuffer, objectToBytes, resetStats, serializePivots, setFixedRecord, setFixedRecord, setIdAutoGeneration, setPreFreeze, setPreFreezeCheck, totalBoxes

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface net.obsearch.Index

close, databaseSize, debug, delete, exists, freeze, getBox, getObject, getStats, getType, init, insert, insert, insertBulk, insertBulk, isFrozen, loadObject, resetStats, setPreFreezeCheck, totalBoxes

Constructor Detail

Sketch64Double

public Sketch64Double(Class<O> type,
                      net.obsearch.pivots.IncrementalPairPivotSelector<O> pivotSelector,
                      int m)
               throws net.obsearch.exception.OBStorageException,
                      net.obsearch.exception.OBException,
                      IOException

Create a new Sketch64Double with m bytes.

Parameters:

type - Type of object that will be stored

pivotSelector - Pivot selection strategy to be employed.

m - The number of bits

bucketPivotCount - Number of pivots per bucket

Throws:

net.obsearch.exception.OBStorageException

net.obsearch.exception.OBException

IOException

Sketch64Double

public Sketch64Double()

Method Detail

getBucket

public BucketObjectDouble<O> getBucket(O object)
                                                 throws net.obsearch.exception.OBException,
                                                        InstantiationException,
                                                        IllegalAccessException

Specified by:

getBucket in class net.obsearch.index.bucket.AbstractBucketIndex<O extends OBDouble,BucketObjectDouble<O extends OBDouble>,OBQueryDouble<O extends OBDouble>,SleekBucketDouble<O extends OBDouble>>

Throws:

net.obsearch.exception.OBException

InstantiationException

IllegalAccessException

getProjection

public net.obsearch.index.ghs.SketchProjection getProjection(BucketObjectDouble<O> bucket)
                                                      throws net.obsearch.exception.OBException

Compute the sketch for the given object.

Specified by:

getProjection in class net.obsearch.index.sorter.AbstractBucketSorter<O extends OBDouble,BucketObjectDouble<O extends OBDouble>,OBQueryDouble<O extends OBDouble>,SleekBucketDouble<O extends OBDouble>,net.obsearch.index.ghs.SketchProjection,net.obsearch.index.ghs.CBitVector>

Throws:

net.obsearch.exception.OBException

instantiateBucketContainer

protected SleekBucketDouble<O> instantiateBucketContainer(byte[] data,
                                                          byte[] address)
                                                                    throws InstantiationException,
                                                                           IllegalAccessException,
                                                                           net.obsearch.exception.OBException

Specified by:

instantiateBucketContainer in class net.obsearch.index.bucket.AbstractBucketIndex<O extends OBDouble,BucketObjectDouble<O extends OBDouble>,OBQueryDouble<O extends OBDouble>,SleekBucketDouble<O extends OBDouble>>

Throws:

InstantiationException

IllegalAccessException

net.obsearch.exception.OBException

primitiveDataTypeSize

protected int primitiveDataTypeSize()

Specified by:

primitiveDataTypeSize in class net.obsearch.index.bucket.AbstractBucketIndex<O extends OBDouble,BucketObjectDouble<O extends OBDouble>,OBQueryDouble<O extends OBDouble>,SleekBucketDouble<O extends OBDouble>>

searchOB

public void searchOB(O object,
                     double r,
                     OBPriorityQueueDouble<O> result)
              throws net.obsearch.exception.NotFrozenException,
                     InstantiationException,
                     net.obsearch.exception.IllegalIdException,
                     IllegalAccessException,
                     net.obsearch.exception.OutOfRangeException,
                     net.obsearch.exception.OBException

Description copied from interface: IndexDouble

Searches the Index and returns OBResult (ID, OB and distance) elements that are closer to "object". The closest element is at the beginning of the list and the farthest elements is at the end of the list. You can control the size of the resulting set when you create the object "result". This becomes the k parameter of the search.

Specified by:

searchOB in interface IndexDouble<O extends OBDouble>

Parameters:

object - The object that has to be searched

r - The range to be used

result - A priority queue that will hold the result

Throws:

net.obsearch.exception.NotFrozenException - if the index has not been frozen.

InstantiationException - If there is a problem when instantiating objects O

net.obsearch.exception.IllegalIdException - This exception is left as a Debug flag. If you receive this exception please report the problem to: http://code.google.com/p/obsearch/issues/list

IllegalAccessException - If there is a problem when instantiating objects O

net.obsearch.exception.OutOfRangeException - If the distance of any object to any other object exceeds the range defined by the user.

net.obsearch.exception.OBException - User generated exception

getKQuery

protected net.obsearch.query.AbstractOBQuery<O> getKQuery(O object,
                                                          int k)
                                                                    throws net.obsearch.exception.OBException,
                                                                           InstantiationException,
                                                                           IllegalAccessException

Specified by:

getKQuery in class net.obsearch.index.sorter.AbstractBucketSorter<O extends OBDouble,BucketObjectDouble<O extends OBDouble>,OBQueryDouble<O extends OBDouble>,SleekBucketDouble<O extends OBDouble>,net.obsearch.index.ghs.SketchProjection,net.obsearch.index.ghs.CBitVector>

Throws:

net.obsearch.exception.OBException

InstantiationException

IllegalAccessException

searchOB

public void searchOB(O object,
                     double r,
                     net.obsearch.filter.Filter<O> filter,
                     OBPriorityQueueDouble<O> result)
              throws net.obsearch.exception.NotFrozenException,
                     InstantiationException,
                     net.obsearch.exception.IllegalIdException,
                     IllegalAccessException,
                     net.obsearch.exception.OutOfRangeException,
                     net.obsearch.exception.OBException

Description copied from interface: IndexDouble

Searches the Index and returns OBResult (ID, OB and distance) elements that are closer to "object". The closest element is at the beginning of the list and the farthest elements is at the end of the list. You can control the size of the resulting set when you create the object "result". This becomes the k parameter of the search. The parameter "filter" is used to remove unwanted objects from the result (a select where clause). Users are responsible to implement at least one filter that can be used with their O.

Specified by:

searchOB in interface IndexDouble<O extends OBDouble>

Parameters:

object - The object that has to be searched

r - The range to be used

result - A priority queue that will hold the result

Throws:

net.obsearch.exception.NotFrozenException - if the index has not been frozen.

InstantiationException - If there is a problem when instantiating objects O

net.obsearch.exception.IllegalIdException - This exception is left as a Debug flag. If you receive this exception please report the problem to: http://code.google.com/p/obsearch/issues/list

IllegalAccessException - If there is a problem when instantiating objects O

net.obsearch.exception.OutOfRangeException - If the distance of any object to any other object exceeds the range defined by the user.

net.obsearch.exception.OBException - User generated exception

knnGraph

public Iterator<List<OBQueryDouble<O>>> knnGraph(int k,
                                                 double r)

Performs a knn graph search

fullMatchLite

public double[] fullMatchLite(O query,
                              boolean filterSame)
                       throws net.obsearch.exception.OBException,
                              IllegalAccessException,
                              InstantiationException

This method returns a list of all the distances of the query against the DB. This helps to calculate EP values in a cheaper way. results that are equal to the original object are added as Double.MAX_VALUE

Specified by:

fullMatchLite in interface IndexDouble<O extends OBDouble>

Parameters:

query -

filterSame - if True we do not return objects o such that query.equals(o)

Returns:

Throws:

net.obsearch.exception.OBException

InstantiationException

IllegalAccessException

maxKEstimationAux

protected void maxKEstimationAux(O object)
                          throws net.obsearch.exception.OBException,
                                 InstantiationException,
                                 IllegalAccessException

Get the kMax closest objects. Count how many different bucket ids are there for each k and fill in accordingly the tables.

Specified by:

maxKEstimationAux in class net.obsearch.index.sorter.AbstractBucketSorter<O extends OBDouble,BucketObjectDouble<O extends OBDouble>,OBQueryDouble<O extends OBDouble>,SleekBucketDouble<O extends OBDouble>,net.obsearch.index.ghs.SketchProjection,net.obsearch.index.ghs.CBitVector>

Parameters:

object -

Throws:

net.obsearch.exception.OBException

InstantiationException

IllegalAccessException

distance

protected double distance(O a,
                          O b)
                   throws net.obsearch.exception.OBException

Overrides:

distance in class net.obsearch.index.AbstractOBIndex<O extends OBDouble>

Throws:

net.obsearch.exception.OBException

getCPSize

protected int getCPSize()

Specified by:

getCPSize in class net.obsearch.index.sorter.AbstractBucketSorter<O extends OBDouble,BucketObjectDouble<O extends OBDouble>,OBQueryDouble<O extends OBDouble>,SleekBucketDouble<O extends OBDouble>,net.obsearch.index.ghs.SketchProjection,net.obsearch.index.ghs.CBitVector>

getPInstance

protected Class<net.obsearch.index.ghs.CBitVector> getPInstance()

Specified by:

getPInstance in class net.obsearch.index.sorter.AbstractBucketSorter<O extends OBDouble,BucketObjectDouble<O extends OBDouble>,OBQueryDouble<O extends OBDouble>,SleekBucketDouble<O extends OBDouble>,net.obsearch.index.ghs.SketchProjection,net.obsearch.index.ghs.CBitVector>